BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033F03SP1|AL429770
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1501 894 0.0
3x_Contig369 436 e-122
>3x_Contig1501
Length = 10010
Score = 894 bits (451), Expect = 0.0
Identities = 466/471 (98%)
Strand = Plus / Plus
Query: 457 aaactccaagatgaaatatccaatgcttcacaaaatgtggttatgattaatcttttaaaa 516
||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 161 aaactccaatattaaatatccaatgcttcacaaaatttgtttatgattaatcttttaaaa 220
Query: 517 caaggcagtaccgctttgaaggctatcaattcacaacttttagatgaagattctatttca 576
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 221 caaggcagtaccgctttgaaggctatcaattcacaacttttagatgaagattctatgtca 280
Query: 577 aacatattagatgatttccaagaaaatacagagaagcaagaccgtattcataatttgtta 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aacatattagatgatttccaagaaaatacagagaagcaagaccgtattcataatttgtta 340
Query: 637 gtaggagagtcggtttccgacaatgatgctcttgaagaagaattgtcactgttagagaag 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gtaggagagtcggtttccgacaatgatgctcttgaagaagaattgtcactgttagagaag 400
Query: 697 gagctatcaacagaggatacaaaagagaaggagaaaaagaagatcgaagaacaaaaatct 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gagctatcaacagaggatacaaaagagaaggagaaaaagaagatcgaagaacaaaaatct 460
Query: 757 gcagcacctttggaatctggctcaacagaagatttgataaagaaacttggatccttgagg 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gcagcacctttggaatctggctcaacagaagatttgataaagaaacttggatccttgagg 520
Query: 817 gtatcgagcagggactctcctcgtgcagagaagacggaagtgaaggaaccgaaaaaggaa 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gtatcgagcagggactctcctcgtgcagagaagacggaagtgaaggaaccgaaaaaggaa 580
Query: 877 gagatgaccgagaaactgttggcctaattcttccgataagagtgattgctc 927
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gagatgaccgagaaactgttggcctaattcttccgataagagtgattgctc 631
>3x_Contig369
Length = 1572
Score = 436 bits (220), Expect = e-122
Identities = 226/228 (99%)
Strand = Plus / Plus
Query: 1 gatctattgaagaataacatcaaagaaagtgctcacaaagcgactgactatgtattcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 gatctattgaagaataacatcaaagaaagtgctcacaaagcgactgactatgtattcact 1169
Query: 61 aagggtcatttttataaggcgtccggaattgatagcatcgtgaaagattgggactcctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 aagggtcatttttataaggcgtccggaattgatagcatcgtgaaagattgggactcctac 1229
Query: 121 ggaataatacttgattacttatgtgataagaatcaaattattgtcggttcagaaaatata 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1230 ggaataatacttgattacttatgtgataagcatcaaattattgtcggttcagaaaatata 1289
Query: 181 gttaagattatctctccgttgttgagtgcgagcccccaggtagcgtcc 228
||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1290 gttaagattatctctccgttgttgagtgcgagccccccggtagcgtcc 1337
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8189
Number of Sequences: 1807
Number of extensions: 8189
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 2
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)